activity
20212025
most citedComputational complexity and pragmatic solutions for flexible tile based DNA self-assembly

1 citations · 1 across the 5 of their papers we have counts for

collaborators

5 papers

q-bio.BM2025

Computation of Minimum Numbers of Tile and Bond-Edge Types for DNA Self-Assembly of Select Archimedean Graphs

Tabitha Merrithew, Jessica Sorrells

This project mathematically models the self-assembly of DNA nanostructures in the shape of select Archimedean graphs using the flexible tile model. Under three different sets of re…

math.CO2025

Optimal Constructions for DNA Self-Assembly of -Regular Graphs

Lisa Baek, Ethan Bove, Michael Cho +5

Within biology, it is of interest to construct DNA complexes of a certain shape. These complexes can be represented through graph theory, using edges to model strands of DNA joined…

math.CO2024

Algorithmic Pot Generation: Algorithms for the Flexible-Tile Model of DNA Self-Assembly

Jacob Ashworth, Luca Grossmann, Fausto Navarro +4

Recent advancements in microbiology have motivated the study of the production of nanostructures with applications such as biomedical computing and molecular robotics. One way to c…

math.CO2022

Tile Based Modeling of DNA Self-Assembly for Two Graph Families with Appended Paths

D. Chloe Griffin, Jessica Sorrells

Branched molecules of deoxyribonucleic acid (DNA) can self-assemble into nanostructures through complementary cohesive strand base pairing. The production of DNA nanostructures is…

math.CO2021★ 1 cited

Computational complexity and pragmatic solutions for flexible tile based DNA self-assembly

Leyda Almodóvar, Jo Ellis-Monaghan, Amanda Harsy +2

Branched junction molecule assembly of DNA nanostructures, pioneered by Seeman's laboratory in the 1980s, has become increasingly sophisticated, as have the assembly targets. A cri…