3 papers
q-bio.GN2026
VeloTree: Inferring single-cell trajectories from RNA velocity fields with varifold distances
Elodie Maignant, Tim Conrad, Christoph von Tycowicz
Trajectory inference is a critical problem in single-cell transcriptomics, which aims to reconstruct the dynamic process underlying a population of cells from sequencing data. Of p…
stat.ME2025
Tree inference with varifold distances
Elodie Maignant, Tim Conrad, Christoph von Tycowicz
In this paper, we consider a tree inference problem motivated by the critical problem in single-cell genomics of reconstructing dynamic cellular processes from sequencing data. In…
cs.CG2021
ICLR 2021 Challenge for Computational Geometry & Topology: Design and Results
Nina Miolane, Matteo Caorsi, Umberto Lupo +30
This paper presents the computational challenge on differential geometry and topology that happened within the ICLR 2021 workshop "Geometric and Topological Representation Learning…