activity
20212023
most citedPersistent hyperdigraph homology and persistent hyperdigraph Laplacians

3 citations · 4 across the 10 of their papers we have counts for

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6 papers · 1 filter

q-bio.BM2023

Artificial intelligence-aided protein engineering: from topological data analysis to deep protein language models

Yuchi Qiu, Guo-Wei Wei

Protein engineering is an emerging field in biotechnology that has the potential to revolutionize various areas, such as antibody design, drug discovery, food security, ecology, an…

q-bio.BM2023

Machine-learning Repurposing of DrugBank Compounds for Opioid Use Disorder

Hongsong Feng, Jian Jiang, Guo-Wei Wei

Opioid use disorder (OUD) is a chronic and relapsing condition that involves the continued and compulsive use of opioids despite harmful consequences. The development of medication…

q-bio.BM2023

Machine-learning Analysis of Opioid Use Disorder Informed by MOR, DOR, KOR, NOR and ZOR-Based Interactome Networks

Hongsong Feng, Rana Elladki, Jian Jiang +1

Opioid use disorder (OUD) continuously poses major public health challenges and social implications worldwide with dramatic rise of opioid dependence leading to potential abuse. De…

q-bio.BM2022

SVSBI: Sequence-based virtual screening of biomolecular interactions

Li Shen, Hongsong Feng, Yuchi Qiu +1

Virtual screening (VS) is an essential technique for understanding biomolecular interactions, particularly, drug design and discovery. The best-performing VS models depend vitally…

q-bio.BM2022

TIDAL: Topology-Inferred Drug Addiction Learning

Zhu Zailiang, Dou Bozheng, Cao Yukang +8

Drug addiction or drug overdose is a global public health crisis, and the design of anti-addiction drugs remains a major challenge due to intricate mechanisms. Since experimental d…

q-bio.BM2022

Virtual screening of DrugBank database for hERG blockers using topological Laplacian-assisted AI models

Hongsong Feng, Guowei Wei

The human {\it ether-a-go-go} (hERG) potassium channel (K) plays a critical role in mediating cardiac action potential. The blockade of this ion channel can potentia…