1 citations · 1 across the 3 of their papers we have counts for
3 papers
q-bio.GN2021★ 1 cited
Application of Markov Structure of Genomes to Outlier Identification and Read Classification
Alan F. Karr, Jason Hauzel, Adam A. Porter +1
In this paper we apply the structure of genomes as second-order Markov processes specified by the distributions of successive triplets of bases to two bioinformatics problems: iden…
stat.ML2021
Measuring Quality of DNA Sequence Data via Degradation
Alan F. Karr, Jason Hauzel, Adam A. Porter +1
We propose and apply a novel paradigm for characterization of genome data quality, which quantifies the effects of intentional degradation of quality. The rationale is that the hig…
q-bio.QM2021
Specified Certainty Classification, with Application to Read Classification for Reference-Guided Metagenomic Assembly
Alan F. Karr, Jason Hauzel, Prahlad Menon +2
Specified Certainty Classification (SCC) is a new paradigm for employing classifiers whose outputs carry uncertainties, typically in the form of Bayesian posterior probabilities. B…