46 citations · 57 across the 3 of their papers we have counts for
6 papers
Generating 3D Molecules for Target Protein Binding
Meng Liu, Youzhi Luo, Kanji Uchino +2
A fundamental problem in drug discovery is to design molecules that bind to specific proteins. To tackle this problem using machine learning methods, here we propose a novel and ef…
Molecule3D: A Benchmark for Predicting 3D Geometries from Molecular Graphs
Zhao Xu, Youzhi Luo, Xuan Zhang +7
Graph neural networks are emerging as promising methods for modeling molecular graphs, in which nodes and edges correspond to atoms and chemical bonds, respectively. Recent studies…
Fast Quantum Property Prediction via Deeper 2D and 3D Graph Networks
Meng Liu, Cong Fu, Xuan Zhang +7
Molecular property prediction is gaining increasing attention due to its diverse applications. One task of particular interests and importance is to predict quantum chemical proper…
DIG: A Turnkey Library for Diving into Graph Deep Learning Research
Meng Liu, Youzhi Luo, Limei Wang +13
Although there exist several libraries for deep learning on graphs, they are aiming at implementing basic operations for graph deep learning. In the research community, implementin…
GraphDF: A Discrete Flow Model for Molecular Graph Generation
Youzhi Luo, Keqiang Yan, Shuiwang Ji
We consider the problem of molecular graph generation using deep models. While graphs are discrete, most existing methods use continuous latent variables, resulting in inaccurate m…
Advanced Graph and Sequence Neural Networks for Molecular Property Prediction and Drug Discovery
Zhengyang Wang, Meng Liu, Youzhi Luo +8
Properties of molecules are indicative of their functions and thus are useful in many applications. With the advances of deep learning methods, computational approaches for predict…