4 citations · 6 across the 4 of their papers we have counts for
4 papers
A Cross Modal Knowledge Distillation & Data Augmentation Recipe for Improving Transcriptomics Representations through Morphological Features
Ihab Bendidi, Yassir El Mesbahi, Alisandra K. Denton +4
Understanding cellular responses to stimuli is crucial for biological discovery and drug development. Transcriptomics provides interpretable, gene-level insights, while microscopy…
TxPert: Leveraging Biochemical Relationships for Out-of-Distribution Transcriptomic Perturbation Prediction
Frederik Wenkel, Wilson Tu, Cassandra Masschelein +12
Accurately predicting cellular responses to genetic perturbations is essential for understanding disease mechanisms and designing effective therapies. Yet exhaustively exploring th…
SAFE setup for generative molecular design
Yassir El Mesbahi, Emmanuel Noutahi
SMILES-based molecular generative models have been pivotal in drug design but face challenges in fragment-constrained tasks. To address this, the Sequential Attachment-based Fragme…
A Short Study on Compressing Decoder-Based Language Models
Tianda Li, Yassir El Mesbahi, Ivan Kobyzev +6
Pre-trained Language Models (PLMs) have been successful for a wide range of natural language processing (NLP) tasks. The state-of-the-art of PLMs, however, are extremely large to b…