35 citations · 43 across the 8 of their papers we have counts for
8 papers
DPSeq: A Novel and Efficient Digital Pathology Classifier for Predicting Cancer Biomarkers using Sequencer Architecture
Min Cen, Xingyu Li, Bangwei Guo +3
In digital pathology tasks, transformers have achieved state-of-the-art results, surpassing convolutional neural networks (CNNs). However, transformers are usually complex and reso…
Time to Embrace Natural Language Processing (NLP)-based Digital Pathology: Benchmarking NLP- and Convolutional Neural Network-based Deep Learning Pipelines
Min Cen, Xingyu Li, Bangwei Guo +3
NLP-based computer vision models, particularly vision transformers, have been shown to outperform CNN models in many imaging tasks. However, most digital pathology artificial-intel…
Prognostic Significance of Tumor-Infiltrating Lymphocytes Using Deep Learning on Pathology Images in Colorectal Cancers
Anran Liu, Xingyu Li, Hongyi Wu +4
Purpose Tumor-infiltrating lymphocytes (TILs) have significant prognostic values in cancers. However, very few automated, deep-learning-based TIL scoring algorithms have been devel…
Predicting microsatellite instability and key biomarkers in colorectal cancer from H&E-stained images: Achieving SOTA predictive performance with fewer data using Swin Transformer
Bangwei Guo, Xingyu Li, Jitendra Jonnagaddala +2
Artificial intelligence (AI) models have been developed for predicting clinically relevant biomarkers, including microsatellite instability (MSI), for colorectal cancers (CRC). How…
A robust and lightweight deep attention multiple instance learning algorithm for predicting genetic alterations
Bangwei Guo, Xingyu Li, Miaomiao Yang +2
Deep-learning models based on whole-slide digital pathology images (WSIs) become increasingly popular for predicting molecular biomarkers. Instance-based models has been the mainst…
Optimize Deep Learning Models for Prediction of Gene Mutations Using Unsupervised Clustering
Zihan Chen, Xingyu Li, Miaomiao Yang +2
Deep learning has become the mainstream methodological choice for analyzing and interpreting whole-slide digital pathology images (WSIs). It is commonly assumed that tumor regions…
Improving Feature Extraction from Histopathological Images Through A Fine-tuning ImageNet Model
Xingyu Li, Min Cen, Jinfeng Xu +2
Due to lack of annotated pathological images, transfer learning has been the predominant approach in the field of digital pathology.Pre-trained neural networks based on ImageNet da…
A Retrospective Analysis using Deep-Learning Models for Prediction of Survival Outcome and Benefit of Adjuvant Chemotherapy in Stage II/III Colorectal Cancer
Xingyu Li, Jitendra Jonnagaddala, Shuhua Yang +2
Most early-stage colorectal cancer (CRC) patients can be cured by surgery alone, and only certain high-risk early-stage CRC patients benefit from adjuvant chemotherapies. However,…