2 papers
q-bio.BM2009
Parametric analysis of RNA folding
Valerie Hower, Christine E. Heitsch
We extend recent methods for parametric sequence alignment to the parameter space for scoring RNA folds. This involves the construction of an RNA polytope. A vertex of this polytop…
math.CO2009
The Discrepancy of the Lex-Least De Bruijn Sequence
Joshua Cooper, Christine Heitsch
We answer the following question of R. L. Graham: What is the discrepancy of the lexicographically-least binary de Bruijn sequence? Here, "discrepancy" refers to the maximum (absol…