4 papers
Multimodal Modeling of CRISPR-Cas12 Activity Using Foundation Models and Chromatin Accessibility Data
Azim Dehghani Amirabad, Yanfei Zhang, Artem Moskalev +5
Predicting guide RNA (gRNA) activity is critical for effective CRISPR-Cas12 genome editing but remains challenging due to limited data, variation across protospacer adjacent motifs…
Geometric Hyena Networks for Large-scale Equivariant Learning
Artem Moskalev, Mangal Prakash, Junjie Xu +3
Processing global geometric context while preserving equivariance is crucial when modeling biological, chemical, and physical systems. Yet, this is challenging due to the computati…
SE(3)-Hyena Operator for Scalable Equivariant Learning
Artem Moskalev, Mangal Prakash, Rui Liao +1
Modeling global geometric context while maintaining equivariance is crucial for accurate predictions in many fields such as biology, chemistry, or vision. Yet, this is challenging…
On genuine invariance learning without weight-tying
Artem Moskalev, Anna Sepliarskaia, Erik J. Bekkers +1
In this paper, we investigate properties and limitations of invariance learned by neural networks from the data compared to the genuine invariance achieved through invariant weight…