113 citations · 405 across the 12 of their papers we have counts for
6 papers · 1 filter
Perspectives for self-driving labs in synthetic biology
Hector Garcia Martin, Tijana Radivojevic, Jeremy Zucker +19
Self-driving labs (SDLs) combine fully automated experiments with artificial intelligence (AI) that decides the next set of experiments. Taken to their ultimate expression, SDLs co…
Ontology Development Kit: a toolkit for building, maintaining, and standardising biomedical ontologies
Nicolas Matentzoglu, Damien Goutte-Gattat, Shawn Zheng Kai Tan +24
Similar to managing software packages, managing the ontology life cycle involves multiple complex workflows such as preparing releases, continuous quality control checking, and dep…
Creation and unification of development and life stage ontologies for animals
Anne Niknejad, Christopher J. Mungall, David Osumi-Sutherland +2
With the new era of genomics, an increasing number of animal species are amenable to large-scale data generation. This had led to the emergence of new multi-species ontologies to a…
Guidelines for reporting cell types: the MIRACL standard
Tiago Lubiana, Paola Roncaglia, Christopher J. Mungall +4
Cell types are at the root of modern biology, and describing them is a core task of the Human Cell Atlas project. Surprisingly, there are no standards for reporting new cell types,…
Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science
Deepak R. Unni, Sierra A. T. Moxon, Michael Bada +21
Within clinical, biomedical, and translational science, an increasing number of projects are adopting graphs for knowledge representation. Graph-based data models elucidate the int…
Recommendations for extending the GFF3 specification for improved interoperability of genomic data
Surya Saha, Scott Cain, Ethalinda K. S. Cannon +8
The GFF3 format is a common, flexible tab-delimited format representing the structure and function of genes or other mapped features (https://github.com/The-Sequence-Ontology/Speci…