most citedOnto2Vec: joint vector-based representation of biological entities and their ontology-based annotations

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cs.CL2018

OPA2Vec: combining formal and informal content of biomedical ontologies to improve similarity-based prediction

Fatima Zohra Smaili, Xin Gao, Robert Hoehndorf

Motivation: Ontologies are widely used in biology for data annotation, integration, and analysis. In addition to formally structured axioms, ontologies contain meta-data in the for…