activity
20142025
most citedSELFIES and the future of molecular string representations

292 citations · 498 across the 9 of their papers we have counts for

collaborators

9 papers

math.GT2025

Linking number of grid models

Senja Barthel, Yuka Kotorii

This paper studies the linking numbers of random links within the grid model. The linking number is treated as a random variable on the isotopy classes of 2-component links, with t…

math.CO2024

Properties of leveled spatial graphs

Senja Barthel, Fabio Buccoliero

We investigate the property of a spatial graph of having a leveled embedding and characterize the abstract graphs with this property. We show that all leveled embeddings are free a…

math.GT2024

Constructing embedded surfaces for cellular embeddings of leveled spatial graphs

Senja Barthel, Fabio Buccoliero

For a given spatial graph , we would like to find a closed orientable surface embedded in in which is c…

physics.chem-ph2022★ 292 cited

SELFIES and the future of molecular string representations

Mario Krenn, Qianxiang Ai, Senja Barthel +28

Artificial intelligence (AI) and machine learning (ML) are expanding in popularity for broad applications to challenging tasks in chemistry and materials science. Examples include…

cs.CG2018

Note on minimal number of skewed unit cells for periodic distance calculation

Senja Barthel

How many copies of a parallelepiped are needed to ensure that for every point in the parallelepiped a copy of each other point exists, such that the distance between them equals th…

cond-mat.mtrl-sci2017★ 194 cited

Pore-geometry recognition: on the importance of quantifying similarity in nanoporous materials

Yongjin Lee, Senja D. Barthel, Paweł Dłotko +3

In most applications of nanoporous materials the pore structure is as important as the chemical composition as a determinant of performance. For example, one can alter performance…

math.GT2015★ 4 cited

On chirality of toroidal embeddings of polyhedral graphs

Senja Barthel

We investigate properties of spatial graphs on the standard torus. It is known that nontrivial embeddings of planar graphs in the torus contain a nontrivial knot or a nonsplit link…

math.GT2015★ 5 cited

Toroidal embeddings of abstractly planar graphs are knotted or linked

Senja Barthel, Dorothy Buck

We give explicit deformations of embeddings of abstractly planar graphs that lie on the standard torus and that contain neither a nontrivial knot nor a n…

math.GT2014★ 3 cited

There exist no Minimally Knotted Planar Spatial Graphs on the Torus

Senja Barthel

We show that all nontrivial embeddings of planar graphs on the torus contain a nontrivial knot or a nonsplit link. This is equivalent to showing that no minimally knotted planar sp…