3 papers
q-bio.MN2018
Context in Synthetic Biology: Memory Effects of Environments with Mono-molecular Reactions
Johannes Falk, Leo Bronstein, Maleen Hanst +2
Synthetic biology aims at designing modular genetic circuits that can be assembled according to the desired function. When embedded in a cell, a circuit module becomes a small subn…
q-bio.QM2018
Marginal process framework: A model reduction tool for Markov jump processes
Leo Bronstein, Heinz Koeppl
Markov jump process models have many applications across science. Often, these models are defined on a state-space of product form and only one of the components of the process is…
q-bio.QM2017
A variational approach to moment-closure approximations for the kinetics of biomolecular reaction networks
Leo Bronstein, Heinz Koeppl
Approximate solutions of the chemical master equation and the chemical Fokker-Planck equation are an important tool in the analysis of biomolecular reaction networks. Previous stud…