4 papers
Effects of Tunable Hydrophobicity on the Collective Hydrodynamics of Janus Particles under Flows
Szu-Pei Fu, Rolf Ryham, Bryan Quaife +1
Active colloidal systems with non-equilibrium self-organization is a long-standing, challenging area in biology. To understand how hydrodynamic flow may be used to actively control…
Two-Dimensional Vesicle Hydrodynamics from Hydrophobic Attraction Potential
Szu-Pei Fu, Bryan Quaife, Rolf Ryham +1
We develop a new model, to our knowledge, for the many-body hydrodynamics of amphiphilic Janus particles suspended in a viscous background flow. The Janus particles interact throug…
Multiscale Hydrophobic Lipid Dynamics Simulated by Efficient Integral Equation Methods
Szu-Pei P. Fu, Rolf J. Ryham, Andreas Klöckner +3
In this paper, we first develop a mathematical model for long-range, hydrophobic attraction between amphiphilic particles. The non-pairwise interactions follow from the first varia…
Efficient Brownian Dynamics Simulation of Single DNA with Hydrodynamic Interactions in Linear Flows
Szu-Pei Fu, Yuan-Nan Young, Shidong Jiang
The coarse-grained molecular dynamics (MD) or Brownian dynamics (BD) simulation is a particle-based approach that has been applied to a wide range of biological problems that invol…