15 citations · 17 across the 3 of their papers we have counts for
4 papers
Translocation through a narrow pore under a puling force
Mohammadreza Niknam Hamidabad, Rouhollah Haji Abdolvahab
We employ a three-dimensional molecular dynamics to simulate translocation of a polymer through a nanopore driven by an external force. The translocation is investigated for differ…
Non-equilibrium effects in chaperone-assisted translocation of a stiff polymer
Rouhollh Haji Abdolvahab
Chaperone-assisted biopolymer translocation is the main model proposed for translocation \textit{in vivo}. A dynamical Monte Carlo method is used to simulate the translocation of a…
Effects of interaction between nanopore and polymer on translocation time
Mohammadreza Niknam Hamidabad, Rouhollah Haji Abdolvahab
Here using LAMMPS molecular dynamics (MD) software, we simulate polymer translocation in 2 dimensions. We do the simulations for weak and moderate forces and for different pore dia…
Chaperone driven polymer translocation through Nanopore: spatial distribution and binding energy
Rouhollah Haji Abdolvahab
Chaperones are binding proteins which work as a driving force to bias the biopolymer translocation by binding to it near the pore and preventing its backsliding. Chaperones may hav…