249 citations · 250 across the 2 of their papers we have counts for
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q-bio.QM2015★ 1 cited
Visualizing Regulation in Rule-based Models
John A. P. Sekar, Jose-Juan Tapia, James R. Faeder
Rule-based modeling is a powerful way to model kinetic interactions in biochemical systems. Rules enable a precise encoding of biochemical interactions at the resolution of sites w…
q-bio.QM2015★ 249 cited
BioNetGen 2.2: Advances in Rule-Based Modeling
Leonard A. Harris, Justin S. Hogg, Jose-Juan Tapia +7
BioNetGen is an open-source software package for rule-based modeling of complex biochemical systems. Version 2.2 of the software introduces numerous new features for both model spe…