2 papers
cs.DS2022
Computing Maximal Unique Matches with the r-index
Sara Giuliani, Giuseppe Romana, Massimiliano Rossi
In recent years, pangenomes received increasing attention from the scientific community for their ability to incorporate population variation information and alleviate reference ge…
cs.DS2019
When a Dollar Makes a BWT
Sara Giuliani, Zsuzsanna Lipták, Francesco Masillo +1
The Burrows-Wheeler-Transform (BWT) is a reversible string transformation which plays a central role in text compression and is fundamental in many modern bioinformatics applicatio…