36 citations · 49 across the 5 of their papers we have counts for
6 papers
The Effect of Permanent Dipoles on Dark States in Molecular Dimers
Matthew Freed, Dominic M. Rouse, Andrea Rocco +3
Many organic molecules possess large permanent dipole moments that differ depending on the electronic state. These permanent dipoles influence both intermolecular coupling and inte…
Noise-induced transitions in gene circuits: a perturbative approach for slow noise
Gerardo Aquino, Andrea Rocco
We consider a generic class of gene circuits affected by nonlinear extrinsic noise. To address this nonlinearity we introduce a general perturbative methodology based on assuming t…
Novel Generic Models for Differentiating Stem Cells Reveal Oscillatory Mechanisms
Saeed Farjami, Karen Camargo Sosa, Jonathan H. P. Dawes +2
Understanding cell fate selection remains a central challenge in developmental biology. We present a class of simple yet biologically-motivated mathematical models for cell differe…
Bimodality in gene expression without feedback: From Gaussian white noise to log-normal coloured noise
Gerardo Aquino, Andrea Rocco
Extrinsic noise-induced transitions to bimodal dynamics have been largely investigated in a variety of chemical, physical, and biological systems. In the standard approach in physi…
Slow protein fluctuations explain the emergence of growth phenotypes and persistence in clonal bacterial populations
Andrea Rocco, Andrzej M. Kierzek, Johnjoe McFadden
One of the most challenging problems in microbiology is to understand how a small fraction of microbes that resists killing by antibiotics can emerge in a population of genetically…
Stochastic Control of Metabolic Pathways
Andrea Rocco
We study the effect of extrinsic noise in metabolic networks. We introduce external random fluctuations at the kinetic level, and show how these lead to a stochastic generalization…