2 papers
q-bio.QM2022
SynopSet: Multiscale Visual Abstraction Set for Explanatory Analysis of DNA Nanotechnology Simulations
Deng Luo, Alexandre Kouyoumdjian, Ondřej Strnad +3
We propose a new abstraction set (SynopSet) that has a continuum of visual representations for the explanatory analysis of molecular dynamics simulations (MDS) in the DNA nanotechn…
q-bio.QM2020
Modeling in the Time of COVID-19: Statistical and Rule-based Mesoscale Models
Ngan Nguyen, Ondrej Strnad, Tobias Klein +8
We present a new technique for rapid modeling and construction of scientifically accurate mesoscale biological models. Resulting 3D models are based on few 2D microscopy scans and…