activity
20202026
most citedHypergraph Models of Biological Networks to Identify Genes Critical to Pathogenic Viral Response

2 citations · 2 across the 4 of their papers we have counts for

collaborators

5 papers

cs.LG2026

The Calls are Coming from Inside the Model: Investigating Probe-based Detection of Tool-Calling Errors in LLMs

Eric Yeats, Brendan Kennedy, Loc Truong +5

The hidden states of large language models (LLMs) are known to capture rich information relating to model knowledge and behavior that can be hard to extract from examination of inp…

cs.LG2026

TAGTorch: A PyTorch Library for Geometry, Topology, and Symmetry-Aware Machine Learning

Brendan Kennedy, Tegan Emerson, Gregory Roek +2

Over the last decade, neural networks have been applied to an increasingly diverse range of applications, including data with rich geometric, topological, or symmetry-related struc…

cs.LG2026

What do Geometric Hallucination Detection Metrics Actually Measure?

Eric Yeats, John Buckheit, Sarah Scullen +9

Hallucination remains a barrier to deploying generative models in high-consequence applications. This is especially true in cases where external ground truth is not readily availab…

cs.LG2021

Sheaves as a Framework for Understanding and Interpreting Model Fit

Henry Kvinge, Brett Jefferson, Cliff Joslyn +1

As data grows in size and complexity, finding frameworks which aid in interpretation and analysis has become critical. This is particularly true when data comes from complex system…

q-bio.QM2020★ 2 cited

Hypergraph Models of Biological Networks to Identify Genes Critical to Pathogenic Viral Response

Song Feng, Emily Heath, Brett Jefferson +25

Background: Representing biological networks as graphs is a powerful approach to reveal underlying patterns, signatures, and critical components from high-throughput biomolecular d…