3 papers
physics.bio-ph2020
Inference of joint conformational distributions from separately-acquired experimental measurements
Jennifer M. Hays, Emily Boland, Peter M. Kasson
Many biomolecules have flexible structures, requiring distributional estimates of their conformations. Experiments to acquire distributional data typically measure pairs of labels…
q-bio.QM2018
Adaptive ensemble simulations of biomolecules
Peter M. Kasson, Shantenu Jha
Recent advances in both theory and computational power have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble…
cs.CE2018
Adaptive Ensemble Biomolecular Simulations at Scale
Vivek Balasubramanian, Travis Jensen, Matteo Turilli +3
Recent advances in both theory and methods have created opportunities to simulate biomolecular processes more efficiently using adaptive ensemble simulations. Ensemble-based simula…