2 papers
cs.LG2021
Dynamic Pooling Improves Nanopore Base Calling Accuracy
Vladimír Boža, Peter Perešíni, Broňa Brejová +1
In nanopore sequencing, electrical signal is measured as DNA molecules pass through the sequencing pores. Translating these signals into DNA bases (base calling) is a highly non-tr…
cs.LG2020
Nanopore Base Calling on the Edge
Peter Perešíni, Vladimír Boža, Broňa Brejová +1
We developed a new base caller DeepNano-coral for nanopore sequencing, which is optimized to run on the Coral Edge Tensor Processing Unit, a small USB-attached hardware accelerator…