5 citations · 8 across the 3 of their papers we have counts for
3 papers
cs.LG2026
Entropy, Disagreement, and the Limits of Foundation Models in Genomics
Maxime Rochkoulets, Lovro Vrček, Mile Šikić
Foundation models in genomics have shown mixed success compared to their counterparts in natural language processing. Yet, the reasons for their limited effectiveness remain poorly…
q-bio.GN2022★ 5 cited
Learning to Untangle Genome Assembly with Graph Convolutional Networks
Lovro Vrček, Xavier Bresson, Thomas Laurent +2
A quest to determine the complete sequence of a human DNA from telomere to telomere started three decades ago and was finally completed in 2021. This accomplishment was a result of…
cs.LG2020★ 3 cited
A step towards neural genome assembly
Lovro Vrček, Petar Veličković, Mile Šikić
De novo genome assembly focuses on finding connections between a vast amount of short sequences in order to reconstruct the original genome. The central problem of genome assembly…