activity
20202026
most citedTxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

8 citations · 25 across the 14 of their papers we have counts for

collaborators

15 papers

cs.AI2026

Agentic discovery of blood biomarker from distilled private health records

Seffi Cohen, Liat Antwarg Friedman, Amir Anisman +7

Routine complete blood counts (CBCs) could yield new biomarkers, but the private records needed to evaluate candidates cannot be shared with frontier language model agents that exc…

cs.AI2026

An AI agent for treatment reasoning over a biomedical tool universe

Shanghua Gao, Ayush Noori, Richard Zhu +13

Treatment reasoning underpins every therapeutic decision, integrating disease context, comorbidities, medications, contraindications, and evolving biomedical knowledge to select an…

cs.AI2026

What Does the AI Doctor Value? Auditing Pluralism in the Clinical Ethics of Language Models

Payal Chandak, Victoria Alkin, David Wu +11

Medicine is inherently pluralistic. Principles such as autonomy, beneficence, nonmaleficence, and justice routinely conflict, and such ethical dilemmas often sharply divide reasona…

cs.AI2026

Unifying biomedical knowledge in a modern multimodal graph

Lucas Vittor, Ayush Noori, Iñaki Arango +5

Biomedical knowledge graphs (KGs) are widely used in the life sciences, yet many are derived from unstructured documents and therefore lack schema-level constraints, whereas graphs…

cs.AI2025★ 1 cited

A global log for medical AI

Ayush Noori, Aaron E. Boussina, Hai Ho Bich +48

Modern computer systems rely on syslog, a universal protocol that records critical events across heterogeneous infrastructure. Medicine's rapidly growing AI stack has no equivalent…

cs.AI2025★ 6 cited

ToolUniverse: An open platform for democratizing AI scientists

Shanghua Gao, Richard Zhu, Pengwei Sui +8

AI scientists are emerging computational systems that serve as collaborative partners in discovery. These systems remain difficult to build because they are bespoke, tied to rigid…

cs.AI2025★ 8 cited

TxAgent: An AI Agent for Therapeutic Reasoning Across a Universe of Tools

Shanghua Gao, Richard Zhu, Zhenglun Kong +5

Precision therapeutics require multimodal adaptive models that generate personalized treatment recommendations. We introduce TxAgent, an AI agent that leverages multi-step reasonin…

cs.LG2024

Multi Scale Graph Neural Network for Alzheimer's Disease

Anya Chauhan, Ayush Noori, Zhaozhi Li +4

Alzheimer's disease (AD) is a complex, progressive neurodegenerative disorder characterized by extracellular A\b{eta} plaques, neurofibrillary tau tangles, glial activation, and ne…

q-bio.BM2024★ 3 cited

Multi-objective generative AI for designing novel brain-targeting small molecules

Ayush Noori, Iñaki Arango, William E. Byrd +1

The strict selectivity of the blood-brain barrier (BBB) represents one of the most formidable challenges to successful central nervous system (CNS) drug delivery. Computational met…

cs.AI2024★ 4 cited

Empowering Biomedical Discovery with AI Agents

Shanghua Gao, Ada Fang, Yepeng Huang +6

We envision "AI scientists" as systems capable of skeptical learning and reasoning that empower biomedical research through collaborative agents that integrate AI models and biomed…

cs.LG2023

Graph AI in Medicine

Ruth Johnson, Michelle M. Li, Ayush Noori +2

In clinical artificial intelligence (AI), graph representation learning, mainly through graph neural networks (GNNs), stands out for its capability to capture intricate relationshi…

cs.LG2022★ 2 cited

Multimodal learning with graphs

Yasha Ektefaie, George Dasoulas, Ayush Noori +2

Artificial intelligence for graphs has achieved remarkable success in modeling complex systems, ranging from dynamic networks in biology to interacting particle systems in physics.…

cs.CL2022

NeuraHealth: An Automated Screening Pipeline to Detect Undiagnosed Cognitive Impairment in Electronic Health Records with Deep Learning and Natural Language Processing

Tanish Tyagi, Colin G. Magdamo, Ayush Noori +22

Dementia related cognitive impairment (CI) is a neurodegenerative disorder, affecting over 55 million people worldwide and growing rapidly at the rate of one new case every 3 secon…

cs.CL2021

Using Deep Learning to Identify Patients with Cognitive Impairment in Electronic Health Records

Tanish Tyagi, Colin G. Magdamo, Ayush Noori +22

Dementia is a neurodegenerative disorder that causes cognitive decline and affects more than 50 million people worldwide. Dementia is under-diagnosed by healthcare professionals -…

cs.CL2020★ 1 cited

Natural Language Processing to Detect Cognitive Concerns in Electronic Health Records Using Deep Learning

Zhuoqiao Hong, Colin G. Magdamo, Yi-han Sheu +16

Dementia is under-recognized in the community, under-diagnosed by healthcare professionals, and under-coded in claims data. Information on cognitive dysfunction, however, is often…