activity
20202026
most citedDesign of Experiments for Verifying Biomolecular Networks

1 citations · 2 across the 6 of their papers we have counts for

collaborators

7 papers

stat.ML2026

Amortized Structured Stochastic Variational Inference for Gaussian Process Latent Variable Models

Maksym Tretiakov, Sarah Filippi, Sarah Lucie Filipp +4

Many machine learning methods aim to approximate the lower-dimensional manifold on which the data lives. A desirable feature of such methods is that they should capture the epistem…

cs.LG2026

Emyx: Fast and efficient all-atom protein generation

Nicholas J. Williams, Ward Haddadin, Matteo P. Ferla +7

Computational enzyme design requires generating proteins that scaffold catalytic residues and ligands, a task that demands both geometric accuracy and structural diversity from the…

stat.ML2024★ 1 cited

Continuous Bayesian Model Selection for Multivariate Causal Discovery

Anish Dhir, Ruby Sedgwick, Avinash Kori +2

Current causal discovery approaches require restrictive model assumptions in the absence of interventional data to ensure structure identifiability. These assumptions often do not…

q-bio.QM2024

Transfer Learning Bayesian Optimization to Design Competitor DNA Molecules for Use in Diagnostic Assays

Ruby Sedgwick, John P. Goertz, Molly M. Stevens +2

With the rise in engineered biomolecular devices, there is an increased need for tailor-made biological sequences. Often, many similar biological sequences need to be made for a sp…

stat.ML2024

Weighted-Sum of Gaussian Process Latent Variable Models

James Odgers, Ruby Sedgwick, Chrysoula Kappatou +2

This work develops a Bayesian non-parametric approach to signal separation where the signals may vary according to latent variables. Our key contribution is to augment Gaussian Pro…

cs.LG2023

Gaussian Processes for Monitoring Air-Quality in Kampala

Clara Stoddart, Lauren Shrack, Richard Sserunjogi +6

Monitoring air pollution is of vital importance to the overall health of the population. Unfortunately, devices that can measure air quality can be expensive, and many cities in lo…

q-bio.QM2020★ 1 cited

Design of Experiments for Verifying Biomolecular Networks

Ruby Sedgwick, John Goertz, Molly Stevens +2

There is a growing trend in molecular and synthetic biology of using mechanistic (non machine learning) models to design biomolecular networks. Once designed, these networks need t…