63 citations · 72 across the 7 of their papers we have counts for
7 papers
From the microscope to High Performance Computing centers, a national effort toward automated data workflows for microscopy facility users in France
Guillaume Gay, Théo Barnouin, Marc Mongy +3
Modern biological microscopy routinely generates large and complex image datasets, including multidimensional, multimodal, and time-resolved acquisitions. While imaging technologie…
Learn2Reg 2024: New Benchmark Datasets Driving Progress on New Challenges
Lasse Hansen, Wiebke Heyer, Christoph Großbröhmer +51
Medical image registration is critical for clinical applications, and fair benchmarking of different methods is essential for monitoring ongoing progress in the field. To date, the…
Bio-Image Informatics Index BIII: A unique database of image analysis tools and workflows for and by the bioimaging community
Chong Zhang, Alban Gaignard, Matus Kalas +15
Bio image analysis has recently become one keystone of biological research but biologists tend to get lost in a plethora of available software and the way to adjust available tools…
Towards deep learning-powered IVF: A large public benchmark for morphokinetic parameter prediction
Tristan Gomez, Magalie Feyeux, Nicolas Normand +4
An important limitation to the development of Artificial Intelligence (AI)-based solutions for In Vitro Fertilization (IVF) is the absence of a public reference benchmark to train…
A registration error estimation framework for correlative imaging
Guillaume Potier, Frédéric Lavancier, Stephan Kunne +1
Correlative imaging workflows are now widely used in bioimaging and aims to image the same sample using at least two different and complementary imaging modalities. Part of the wor…
QUAREP-LiMi: A community-driven initiative to establish guidelines for quality assessment and reproducibility for instruments and images in light microscopy
Glyn Nelson, Ulrike Boehm, Steve Bagley +97
In April 2020, the QUality Assessment and REProducibility for Instruments and Images in Light Microscopy (QUAREP-LiMi) initiative was formed. This initiative comprises imaging scie…
Cross-modal registration using point clouds and graph-matching in the context of correlative microscopies
Stephan Kunne, Guillaume Potier, Jean Mérot +1
Correlative microscopy aims at combining two or more modalities to gain more information than the one provided by one modality on the same biological structure. Registration is nee…