activity
20142026
most citedWeighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses

122 citations · 122 across the 5 of their papers we have counts for

collaborators

5 papers

math.CO2026

Pairwise Compatibility Representations of Multidimensional Grid Graphs

Sheikh Azizul Hakim, Md. Shamsuzzoha Bayzid

Pairwise compatibility graphs (PCGs) represent graph adjacency by an interval of leaf-to-leaf distances in a weighted tree. We study grid graphs under the PCG model and two natural…

math.CO2026

On Threshold Pairwise Compatibility Graphs

Sheikh Azizul Hakim, Md. Shamsuzzoha Bayzid

Pairwise Compatibility Graphs (PCGs) form a tree-metric graph class that originated in phylogeny and has since attracted sustained interest in graph theory. Several natural general…

cs.CV2021

3D-FFS: Faster 3D object detection with Focused Frustum Search in sensor fusion based networks

Aniruddha Ganguly, Tasin Ishmam, Khandker Aftarul Islam +2

In this work we propose 3D-FFS, a novel approach to make sensor fusion based 3D object detection networks significantly faster using a class of computationally inexpensive heuristi…

q-bio.QM2020

Align-gram : Rethinking the Skip-gram Model for Protein Sequence Analysis

Nabil Ibtehaz, S. M. Shakhawat Hossain Sourav, Md. Shamsuzzoha Bayzid +1

Background: The inception of next generations sequencing technologies have exponentially increased the volume of biological sequence data. Protein sequences, being quoted as the `l…

q-bio.QM2014★ 122 cited

Weighted Statistical Binning: enabling statistically consistent genome-scale phylogenetic analyses

Md. Shamsuzzoha Bayzid, Siavash Mirarab, Bastien Boussau +1

Because biological processes can make different loci have different evolutionary histories, species tree estimation requires multiple loci from across the genome. While many proces…