activity
20202026
most citedRawHash: Enabling Fast and Accurate Real-Time Analysis of Raw Nanopore Signals for Large Genomes

46 citations · 133 across the 16 of their papers we have counts for

collaborators

20 papers

cs.AR2026

CertiFlash: A Formal Verification Framework for Flash Translation Layers in Computational Solid State Drives

Harshita Gupta, Mayank Kabra, Rakesh Nadig +10

Data-intensive applications move large amounts of data from storage to the compute unit, incurring significant data movement overhead. Storage-centric computing reduces this overhe…

cs.AR2026

Storage-Centric System Designs for Enabling Fast, Efficient, and Low-Cost Genomic and Metagenomic Analyses

Nika Mansouri Ghiasi

Genomic and metagenomic analyses play critical roles in many fields, such as precision medicine, urgent clinical settings, discovering early warnings of communicable diseases, ensu…

cs.AR2026

Enabling Fast, Efficient, and Low-Cost Genomic and Metagenomic Analyses via Storage-Centric System Designs

Nika Mansouri Ghiasi, Onur Mutlu

Due to the challenges of analyzing and storing massive volumes of genomic and metagenomic sequence data, significant efforts have been made to accelerate (meta)genomic analyses and…

cs.AR2026

GRAINS: Storage-Aware Algorithm-Architecture Co-Design Enabling High-Performance and Low-Cost Graph-Based Genome Analysis

Nika Mansouri Ghiasi, Harun Mustafa, Talu Güloglu +8

Graph-based representations of genome sequences have emerged as a powerful approach for representing massive genomic databases in an expressive and efficient way. Despite their ben…

cs.AR2026

Architecture for Health Initiative (Arch4Health): Computational Challenges in Health-Related Applications and the Role of Computer Architecture in Addressing Them

Nika Mansouri Ghiasi, Konstantina Koliogeorgi, Onur Mutlu

Recent biotechnological advances enable high-throughput, low-cost, and accurate biological data generation. This wealth of data enables unique opportunities for advancing healthcar…

cs.DB2025

A decentralized future for the open-science databases

Gaurav Sharma, Viorel Munteanu, Nika Mansouri Ghiasi +18

Continuous and reliable access to curated biological data repositories is indispensable for accelerating rigorous scientific inquiry and fostering reproducible research. Centralize…