324 citations · 427 across the 13 of their papers we have counts for
13 papers
Structural Properties of Small Semiconductor-Binding Synthetic Peptides
Gökhan Gökoğlu, Michael Bachmann, Tarık Çelik +1
We have performed exhaustive multicanonical Monte Carlo simulations of three 12-residue synthetic peptides in order to investigate the thermodynamic and structural properties as we…
The structure of the free energy surface of coarse-grained off-lattice protein models
E. Akturk, H. Arkin Olgar, T. Celik
We have performed multicanonical simulations of hydrophobic-hydrophilic heteropolymers with a simple effective, coarse-grained off-lattice model to study the structure and the topo…
Solvation Effects on Free Energy Surface of Polyalanine
G. Gokoglu, H. Arkin, E. Akturk +1
We have simulated 10-residue polyalanine chain by multicanonical method to visualize the 3D topographic picture of the free energy landscape over the whole range of temperatures, h…
Structure of the Energy Landscape of Short Peptides
H. Arkin, T. Celik
We have simulated, as a showcase, the pentapeptide Met-enkephalin (Tyr-Gly-Gly-Phe-Met) to visualize the energy landscape and investigate the conformational coverage by the multica…
Study of Cluster Fluctuations in Two-dimensional q-State Potts Model
Meral Aydın, Yiğit Gündüç, Tarık Çelik
The two-dimensional Potts Model with 2 to 10 states is studied using a cluster algorithm to calculate fluctuations in cluster size as well as commonly used quantities like equilibr…
Scaling of cluster fluctuations in two-dimensional q=5 and 7 state Potts models
Burcu Ortakaya, Yiğit Gündüç, Meral Aydın +1
The scaling behavior of fluctuations in cluster size is studied in q=5 and 7 state Potts models. This quantity exhibits scaling behavior on small lattices where the scaling of loca…