2 papers
q-bio.MN2026
Amplification at Equilibrium: Structural and Thermodynamic Limitations, and Implementation
Hamidreza Akef, Chia-Yu Sung, Aneesh Vanguri +1
Amplifying weak molecular signals is essential in both natural and engineered biochemical systems. While most amplification schemes operate out of equilibrium, relying on kinetic b…
cs.DS2025
Computing and Bounding Equilibrium Concentrations in Athermic Chemical Systems
Hamidreza Akef, Minki Hhan, David Soloveichik
Computing equilibrium concentrations of molecular complexes is generally analytically intractable and requires numerical approaches. In this work we focus on the polymer-monomer le…