73 citations · 113 across the 7 of their papers we have counts for
7 papers
RamanSPy: An open-source Python package for integrative Raman spectroscopy data analysis
Dimitar Georgiev, Simon Vilms Pedersen, Ruoxiao Xie +3
Raman spectroscopy is a non-destructive and label-free chemical analysis technique, which plays a key role in the analysis and discovery cycle of various branches of science. Nonet…
Interaction Measures, Partition Lattices and Kernel Tests for High-Order Interactions
Zhaolu Liu, Robert L. Peach, Pedro A. M. Mediano +1
Models that rely solely on pairwise relationships often fail to capture the complete statistical structure of the complex multivariate data found in diverse domains, such as socio-…
Kernel-based Joint Independence Tests for Multivariate Stationary and Non-stationary Time Series
Zhaolu Liu, Robert L. Peach, Felix Laumann +2
Multivariate time series data that capture the temporal evolution of interconnected systems are ubiquitous in diverse areas. Understanding the complex relationships and potential d…
ICE-NODE: Integration of Clinical Embeddings with Neural Ordinary Differential Equations
Asem Alaa, Erik Mayer, Mauricio Barahona
Early diagnosis of disease can lead to improved health outcomes, including higher survival rates and lower treatment costs. With the massive amount of information available in elec…
Prediction of protein allosteric signalling pathways and functional residues through paths of optimised propensity
Nan Wu, Sophia N. Yaliraki, Mauricio Barahona
Allostery commonly refers to the mechanism that regulates protein activity through the binding of a molecule at a different, usually distal, site from the orthosteric site. The omn…
Similarity measure for sparse time course data based on Gaussian processes
Zijing Liu, Mauricio Barahona
We propose a similarity measure for sparsely sampled time course data in the form of a log-likelihood ratio of Gaussian processes (GP). The proposed GP similarity is similar to a B…
Uncovering allosteric pathways in caspase-1 with Markov transient analysis and multiscale community detection
B. Amor, S. N. Yaliraki, R. Woscholski +1
Allosteric regulation at distant sites is central to many cellular processes. In particular, allosteric sites in proteins are a major target to increase the range and selectivity o…