72 citations · 252 across the 5 of their papers we have counts for
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cond-mat.stat-mech2018★ 66 cited
Charge fluctuation effects on the shape of flexible polyampholytes with applications to Intrinsically disordered proteins
Himadri S. Samanta, Debayan Chakraborty, D. Thirumalai
Random polyampholytes (PAs) contain positively and negatively charged monomers that are distributed randomly along the polymer chain. The interaction between charges is assumed to…
q-bio.BM2018★ 71 cited
Sequence-dependent Three Interaction Site (TIS) Model for Single and Double-stranded DNA
Debayan Chakraborty, Naoto Hori, Dave Thirumalai
We develop a robust coarse-grained model for single and double stranded DNA by representing each nucleotide by three interaction sites (TIS) located at the centers of mass of sugar…