activity
20212025
most citedRecognition and reconstruction of cell differentiation patterns with deep learning

2 citations · 6 across the 11 of their papers we have counts for

collaborators

11 papers

cs.CV2025

Hidden in Plain Sight -- Class Competition Focuses Attribution Maps

Nils Philipp Walter, Jilles Vreeken, Jonas Fischer

Attribution methods reveal which input features a neural network uses for a prediction, adding transparency to their decisions. A common problem is that these attributions seem uns…

cs.LG2023

Finding Interpretable Class-Specific Patterns through Efficient Neural Search

Nils Philipp Walter, Jonas Fischer, Jilles Vreeken

Discovering patterns in data that best describe the differences between classes allows to hypothesize and reason about class-specific mechanisms. In molecular biology, for example,…

cs.CL2023

Understanding and Mitigating Classification Errors Through Interpretable Token Patterns

Michael A. Hedderich, Jonas Fischer, Dietrich Klakow +1

State-of-the-art NLP methods achieve human-like performance on many tasks, but make errors nevertheless. Characterizing these errors in easily interpretable terms gives insight int…

cs.LG2023★ 1 cited

Preserving local densities in low-dimensional embeddings

Jonas Fischer, Rebekka Burkholz, Jilles Vreeken

Low-dimensional embeddings and visualizations are an indispensable tool for analysis of high-dimensional data. State-of-the-art methods, such as tSNE and UMAP, excel in unveiling l…

q-bio.CB2022★ 2 cited

Recognition and reconstruction of cell differentiation patterns with deep learning

Robin Dirk, Jonas L. Fischer, Simon Schardt +2

Cell lineage decisions occur in three-dimensional spatial patterns that are difficult to identify by eye. There is an ongoing effort to replicate such patterns using mathematical m…

cs.LG2021

Plant 'n' Seek: Can You Find the Winning Ticket?

Jonas Fischer, Rebekka Burkholz

The lottery ticket hypothesis has sparked the rapid development of pruning algorithms that aim to reduce the computational costs associated with deep learning during training and m…

cs.IT2021

Estimating Mutual Information via Geodesic NN

Alexander Marx, Jonas Fischer

Estimating mutual information (MI) between two continuous random variables and allows to capture non-linear dependencies between them, non-parametrically. As such, MI estim…

cs.LG2021★ 2 cited

Lottery Tickets with Nonzero Biases

Jonas Fischer, Advait Gadhikar, Rebekka Burkholz

The strong lottery ticket hypothesis holds the promise that pruning randomly initialized deep neural networks could offer a computationally efficient alternative to deep learning w…

cs.LG2021★ 1 cited

Label-Descriptive Patterns and Their Application to Characterizing Classification Errors

Michael Hedderich, Jonas Fischer, Dietrich Klakow +1

State-of-the-art deep learning methods achieve human-like performance on many tasks, but make errors nevertheless. Characterizing these errors in easily interpretable terms gives i…

cs.LG2021

Federated Learning from Small Datasets

Michael Kamp, Jonas Fischer, Jilles Vreeken

Federated learning allows multiple parties to collaboratively train a joint model without sharing local data. This enables applications of machine learning in settings of inherentl…

cs.LG2021

Factoring out prior knowledge from low-dimensional embeddings

Edith Heiter, Jonas Fischer, Jilles Vreeken

Low-dimensional embedding techniques such as tSNE and UMAP allow visualizing high-dimensional data and therewith facilitate the discovery of interesting structure. Although they ar…