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cs.LG2026
VANDAM: Viewing a nucleotide sequence with DNA molecular priors
Jeremy Levy, Ariel Larey, Yury Nahshan +18
Contemporary Genomic Foundation Models (GFMs) rely on a DNA-as-a-string paradigm that employs masked token prediction objectives for pretraining. However, this abstraction does not…
cs.LG2023
Harnessing Digital Pathology And Causal Learning To Improve Eosinophilic Esophagitis Dietary Treatment Assignment
Eliel Aknin, Ariel Larey, Julie M. Caldwell +14
Eosinophilic esophagitis (EoE) is a chronic, food antigen-driven, allergic inflammatory condition of the esophagus associated with elevated esophageal eosinophils. EoE is a top cau…