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20212026
most citedDirichlet Flow Matching with Applications to DNA Sequence Design

10 citations · 28 across the 30 of their papers we have counts for

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6 papers · 1 filter

cs.LG2024

An Information Criterion for Controlled Disentanglement of Multimodal Data

Chenyu Wang, Sharut Gupta, Xinyi Zhang +4

Multimodal representation learning seeks to relate and decompose information inherent in multiple modalities. By disentangling modality-specific information from information that i…

cs.LG2024★ 1 cited

Fine-Tuning Discrete Diffusion Models via Reward Optimization with Applications to DNA and Protein Design

Chenyu Wang, Masatoshi Uehara, Yichun He +7

Recent studies have demonstrated the strong empirical performance of diffusion models on discrete sequences across domains from natural language to biological sequence generation.…

cs.LG2024

Derivative-Free Guidance in Continuous and Discrete Diffusion Models with Soft Value-Based Decoding

Xiner Li, Yulai Zhao, Chenyu Wang +8

Diffusion models excel at capturing the natural design spaces of images, molecules, DNA, RNA, and protein sequences. However, rather than merely generating designs that are natural…

cs.CL2024

Evaluating Zero-Shot Long-Context LLM Compression

Chenyu Wang, Yihan Wang, Kai Li

This study evaluates the effectiveness of zero-shot compression techniques on large language models (LLMs) under long-context. We identify the tendency for computational errors to…

cs.LG2024

In-Context Symmetries: Self-Supervised Learning through Contextual World Models

Sharut Gupta, Chenyu Wang, Yifei Wang +2

At the core of self-supervised learning for vision is the idea of learning invariant or equivariant representations with respect to a set of data transformations. This approach, ho…

q-bio.BM2024★ 10 cited

Dirichlet Flow Matching with Applications to DNA Sequence Design

Hannes Stark, Bowen Jing, Chenyu Wang +4

Discrete diffusion or flow models could enable faster and more controllable sequence generation than autoregressive models. We show that naïve linear flow matching on the simplex i…