2 papers
physics.chem-ph2018
Identification of kinetic order parameters for non-equilibrium dynamics
Fabian Paul, Hao Wu, Maximilian Vossel +2
A popular approach to analyze the dynamics of high-dimensional many-body systems, such as macromolecules, is to project the trajectories onto a space of slowly-varying collective v…
physics.bio-ph2018
Variational Selection of Features for Molecular Kinetics
Martin K. Scherer, Brooke E. Husic, Moritz Hoffmann +3
The modeling of atomistic biomolecular simulations using kinetic models such as Markov state models (MSMs) has had many notable algorithmic advances in recent years. The variationa…