735 citations · 836 across the 3 of their papers we have counts for
3 papers
q-bio.GN2023★ 92 cited
Evaluation of large language models for discovery of gene set function
Mengzhou Hu, Sahar Alkhairy, Ingoo Lee +6
Gene set analysis is a mainstay of functional genomics, but it relies on curated databases of gene functions that are incomplete. Here we evaluate five Large Language Models (LLMs)…
q-bio.QM2022★ 9 cited
Infusing Linguistic Knowledge of SMILES into Chemical Language Models
Ingoo Lee, Hojung Nam
The simplified molecular-input line-entry system (SMILES) is the most popular representation of chemical compounds. Therefore, many SMILES-based molecular property prediction model…
q-bio.QM2018★ 735 cited
DeepConv-DTI: Prediction of drug-target interactions via deep learning with convolution on protein sequences
Ingoo Lee, Jongsoo Keum, Hojung Nam
Identification of drug-target interactions (DTIs) plays a key role in drug discovery. The high cost and labor-intensive nature of in vitro and in vivo experiments have highlighted…