56 citations · 81 across the 4 of their papers we have counts for
4 papers
Compiling Combinatorial Genetic Circuits with Semantic Inference
William Waites, Goksel Misirli, Matteo Cavaliere +2
A central strategy of synthetic biology is to understand the basic processes of living creatures through engineering organisms using the same building blocks. Biological machines d…
Annotations for Rule-Based Models
Matteo Cavaliere, Vincent Danos, Ricardo Honorato-Zimmer +1
The chapter reviews the syntax to store machine-readable annotations and describes the mapping between rule-based modelling entities (e.g., agents and rules) and these annotations.…
Cooperation and competition in the dynamics of tissue architecture during homeostasis and tumorigenesis
Attila Csikász-Nagy, Luis M. Escudero, Martial Guillaud +3
The construction of a network of cell-to-cell contacts makes it possible to characterize the patterns and spatial organisation of tissues. Such networks are highly dynamic, dependi…
Prosperity is associated with instability in dynamical networks
Matteo Cavaliere, Sean Sedwards, Corina E. Tarnita +2
Social, biological and economic networks grow and decline with occasional fragmentation and re-formation, often explained in terms of external perturbations. We show that these phe…