28 citations · 40 across the 7 of their papers we have counts for
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cs.DM2016★ 2 cited
Chain Reduction Preserves the Unrooted Subtree Prune-and-Regraft Distance
Chris Whidden, Frederick A. Matsen
The subtree prune-and-regraft (SPR) distance metric is a fundamental way of comparing evolutionary trees. It has wide-ranging applications, such as to study lateral genetic transfe…
cs.DM2015
Ricci-Ollivier Curvature of the Rooted Phylogenetic Subtree-Prune-Regraft Graph
Chris Whidden, Frederick A. Matsen
Statistical phylogenetic inference methods use tree rearrangement operations to perform either hill-climbing local search or Markov chain Monte Carlo across tree topologies. The ca…