1 citations · 2 across the 3 of their papers we have counts for
3 papers
Lerna: Transformer Architectures for Configuring Error Correction Tools for Short- and Long-Read Genome Sequencing
Atul Sharma, Pranjal Jain, Ashraf Mahgoub +3
Sequencing technologies are prone to errors, making error correction (EC) necessary for downstream applications. EC tools need to be manually configured for optimal performance. We…
JANUS: Benchmarking Commercial and Open-Source Cloud and Edge Platforms for Object and Anomaly Detection Workloads
Karthick Shankar, Pengcheng Wang, Ran Xu +2
With diverse IoT workloads, placing compute and analytics close to where data is collected is becoming increasingly important. We seek to understand what is the performance and the…
ATHENA: Automated Tuning of Genomic Error Correction Algorithms using Language Models
Mustafa Abdallah, Ashraf Mahgoub, Saurabh Bagchi +1
The performance of most error-correction algorithms that operate on genomic sequencer reads is dependent on the proper choice of its configuration parameters, such as the value of…