activity
20142025
most citedGuacaMol: Benchmarking Models for De Novo Molecular Design

845 citations · 1.6k across the 14 of their papers we have counts for

collaborators

14 papers

cs.CL2025★ 49 cited

Gemini 2.5: Pushing the Frontier with Advanced Reasoning, Multimodality, Long Context, and Next Generation Agentic Capabilities

Gheorghe Comanici, Eric Bieber, Mike Schaekermann +3431

In this report, we introduce the Gemini 2.X model family: Gemini 2.5 Pro and Gemini 2.5 Flash, as well as our earlier Gemini 2.0 Flash and Flash-Lite models. Gemini 2.5 Pro is our…

physics.chem-ph2022★ 19 cited

Ultra-Fast Semi-Empirical Quantum Chemistry for High-Throughput Computational Campaigns with Sparrow

Francesco Bosia, Peikun Zheng, Alain Vaucher +3

Semi-empirical quantum chemical approaches are known to compromise accuracy for feasibility of calculations on huge molecules. However, the need for ultrafast calculations in inter…

physics.chem-ph2020

Mapping the Space of Chemical Reactions Using Attention-Based Neural Networks

Philippe Schwaller, Daniel Probst, Alain C. Vaucher +4

Organic reactions are usually assigned to classes containing reactions with similar reagents and mechanisms. Reaction classes facilitate the communication of complex concepts and e…

physics.chem-ph2019★ 108 cited

Training neural nets to learn reactive potential energy surfaces using interactive quantum chemistry in virtual reality

Silvia Amabilino, Lars A. Bratholm, Simon J. Bennie +3

Whilst the primary bottleneck to a number of computational workflows was not so long ago limited by processing power, the rise of machine learning technologies has resulted in a pa…

q-bio.QM2018★ 845 cited

GuacaMol: Benchmarking Models for De Novo Molecular Design

Nathan Brown, Marco Fiscato, Marwin H. S. Segler +1

De novo design seeks to generate molecules with required property profiles by virtual design-make-test cycles. With the emergence of deep learning and neural generative models in m…

physics.chem-ph2018★ 263 cited

Exploration of Reaction Pathways and Chemical Transformation Networks

Gregor N. Simm, Alain C. Vaucher, Markus Reiher

For the investigation of chemical reaction networks, the identification of all relevant intermediates and elementary reactions is mandatory. Many algorithmic approaches exist that…

physics.chem-ph2018★ 74 cited

Semiempirical Molecular Orbital Models based on the Neglect of Diatomic Differential Overlap Approximation

Tamara Husch, Alain C. Vaucher, Markus Reiher

Semiempirical molecular orbital (SEMO) models based on the neglect of diatomic differential overlap (NDDO) approximation efficiently solve the self-consistent field equations by ra…

physics.chem-ph2018★ 50 cited

Minimum Energy Paths and Transition States by Curve Optimization

Alain C. Vaucher, Markus Reiher

Transition states and minimum energy paths are essential to understand and predict chemical reactivity. Double-ended methods represent a standard approach for their determination.…

physics.chem-ph2018★ 14 cited

Integrated Reaction Path Processing from Sampled Structure Sequences

Michael A. Heuer, Alain C. Vaucher, Moritz P. Haag +1

Sampled structure sequences obtained, for instance, from real-time reactivity explorations or first-principles molecular dynamics simulations contain valuable information about che…

physics.chem-ph2016★ 38 cited

Steering Orbital Optimization out of Local Minima and Saddle Points Toward Lower Energy

Alain C. Vaucher, Markus Reiher

The general procedure underlying Hartree-Fock and Kohn-Sham density functional theory calculations consists in optimizing orbitals for a self-consistent solution of the Roothaan-Ha…

physics.comp-ph2016★ 23 cited

Molecular propensity as a driver for explorative reactivity studies

Alain C. Vaucher, Markus Reiher

Quantum chemical studies of reactivity involve calculations on a large number of molecular structures and comparison of their energies. Already the set-up of these calculations lim…

physics.chem-ph2015★ 24 cited

Accelerating Wave Function Convergence in Interactive Quantum Chemical Reactivity Studies

Adrian H. Mühlbach, Alain C. Vaucher, Markus Reiher

The inherently high computational cost of iterative self-consistent-field (SCF) methods proves to be a critical issue delaying visual and haptic feedback in real-time quantum chemi…

physics.comp-ph2015★ 28 cited

Real-time feedback from iterative electronic structure calculations

Alain C. Vaucher, Moritz P. Haag, Markus Reiher

Real-time feedback from iterative electronic structure calculations requires to mediate between the inherently unpredictable execution times of the iterative algorithm employed and…

physics.chem-ph2014★ 63 cited

Interactive Chemical Reactivity Exploration

Moritz P. Haag, Alain C. Vaucher, Mael Bosson +2

Elucidating chemical reactivity in complex molecular assemblies of a few hundred atoms is, despite the remarkable progress in quantum chemistry, still a major challenge. Black-box…