15 citations · 32 across the 5 of their papers we have counts for
5 papers
RNA Secondary Structures: Complex Statics and Glassy Dynamics
S. Wolfsheimer, B. Burghardt, A. Mann +1
Models for RNA secondary structures (the topology of folded RNA) without pseudo knots are disordered systems with a complex state-space below a critical temperature. Hence, a compl…
RNA secondary structure design
Bernd Burghardt, Alexander K. Hartmann
We consider the inverse-folding problem for RNA secondary structures: for a given (pseudo-knot-free) secondary structure find a sequence that has that structure as its ground state…
What do we learn from correlations of local and global network properties?
Magnus Jungsbluth, Bernd Burghardt, Alexander K. Hartmann
In complex networks a common task is to identify the most important or "central" nodes. There are several definitions, often called centrality measures, which often lead to differe…
Dependence of RNA secondary structure on the energy model
Bernd Burghardt, Alexander K. Hartmann
We analyze a microscopic RNA model, which includes two widely used models as limiting cases, namely it contains terms for bond as well as for stacking energies. We numerically inve…
Numerical evaluation of coherent-state path integrals with applications to time-dependent problems
Bernd Burghardt, Joachim Stolze
We study the application of the coherent-state path integral as a numerical tool for wave-packet propagation. The numerical evaluation of path integrals is reduced to a matrix-vect…