189 citations · 454 across the 10 of their papers we have counts for
10 papers
Transcription rate dynamics and RNA copy number noise: General relations and data-driven predictions
Amara McCune, Ido Golding, Shlomi Reuveni +1
Stochastic models of gene expression typically begin with a microscopic model of transcription and propagate its statistics to the RNA distribution. Here we develop a doubly stocha…
Gene expression in growing cells: A biophysical primer
Ido Golding, Ariel Amir
Cell growth and gene expression, essential elements of all living systems, have long been the focus of biophysical interrogation. Advances in single-cell methods have invigorated t…
Lambda-prophage induction modeled as a cooperative failure mode of lytic repression
Nicholas Chia, Ido Golding, Nigel Goldenfeld
We analyze a system-level model for lytic repression of lambda-phage in E. coli using reliability theory, showing that the repressor circuit comprises 4 redundant components whose…
Quantitative transcription factor binding kinetics at the single-molecule level
Yufang Wang, Ling Guo, Ido Golding +2
We have investigated the binding interaction between the bacteriophage lambda repressor CI and its target DNA using total internal reflection fluorescence microscopy. Large, step-w…
Modeling branching and chiral colonial patterning of lubricating bacteria
Eshel Ben-Jacob, Inon Cohen, Ido Golding +1
In nature, microorganisms must often cope with hostile environmental conditions. To do so they have developed sophisticated cooperative behavior and intricate communication capabil…
Spatio-selection in Expanding Bacterial Colonies
Ido Golding, Inon Cohen, Eshel Ben-Jacob
Segregation of populations is a key question in evolution theory. One important aspect is the relation between spatial organization and the population's composition. Here we study…