3 papers
cs.DC2021
OpenACC Acceleration of an Agent-Based Biological Simulation Framework
Matt Stack, Paul Macklin, Robert Searles +1
Computational biology has increasingly turned to agent-based modeling to explore complex biological systems. Biological diffusion (diffusion, decay, secretion, and uptake) is a key…
q-bio.OT2019
Mapping the Human Body at Cellular Resolution -- The NIH Common Fund Human BioMolecular Atlas Program
Michael P Snyder, Shin Lin, Amanda Posgai +22
Transformative technologies are enabling the construction of three dimensional (3D) maps of tissues with unprecedented spatial and molecular resolution. Over the next seven years,…
q-bio.QM2018
Key challenges facing data-driven multicellular systems biology
Paul Macklin
Increasingly sophisticated experiments, coupled with large-scale computational models, have the potential to systematically test biological hypotheses to drive our understanding of…