31 citations · 56 across the 6 of their papers we have counts for
7 papers
AxonSynth: Domain-Randomized Synthetic Data for Zero-Shot 3D Axon Segmentation in Light-Sheet Microscopy
Edward Gaibor, Kyriaki-Margarita Bintsi, Carmen Luz Leiva Ureta +9
Accurate segmentation of axons in 3D microscopy data is important for analyzing white-matter organization, but dense ground truth labels are expensive to obtain. Existing supervise…
MORSE: Multiple Orthogonal Reference Sensitivity Encoding
Oliver Josephs, Barbara Dymerska, Nadine N. Graedel +3
Parallel imaging is ubiquitous in MRI, enabling diverse applications such as ultra-high-resolution functional and quantitative imaging with greater temporal resolution or reduced s…
SPM 25: open source neuroimaging analysis software
Tim M. Tierney, Nicholas A. Alexander, Nicole Labra Avila +17
Statistical Parametric Mapping (SPM) is an integrated set of methods for testing hypotheses about the brain's structure and function, using data from imaging devices. These methods…
Nonlinear Markov Random Fields Learned via Backpropagation
Mikael Brudfors, Yaël Balbastre, John Ashburner
Although convolutional neural networks (CNNs) currently dominate competitions on image segmentation, for neuroimaging analysis tasks, more classical generative approaches based on…
MRI Super-Resolution using Multi-Channel Total Variation
Mikael Brudfors, Yael Balbastre, Parashkev Nachev +1
This paper presents a generative model for super-resolution in routine clinical magnetic resonance images (MRI), of arbitrary orientation and contrast. The model recasts the recove…
An Algorithm for Learning Shape and Appearance Models without Annotations
John Ashburner, Mikael Brudfors, Kevin Bronik +1
This paper presents a framework for automatically learning shape and appearance models for medical (and certain other) images. It is based on the idea that having a more accurate s…
Diffeomorphic brain shape modelling using Gauss-Newton optimisation
Yaël Balbastre, Mikael Brudfors, Kevin Bronik +1
Shape modelling describes methods aimed at capturing the natural variability of shapes and commonly relies on probabilistic interpretations of dimensionality reduction techniques s…