131 citations · 148 across the 3 of their papers we have counts for
4 papers
SurfDist: Interpretable Three-Dimensional Instance Segmentation Using Curved Surface Patches
Jackson Borchardt, Saul Kato
We present SurfDist, a convolutional neural network architecture for three-dimensional volumetric instance segmentation. SurfDist enables prediction of instances represented as clo…
Implicitization of Biquadratic Bézier Triangle and Quadrilateral Surfaces
Jackson Borchardt, Saul Kato
We produce implicit equations for general biquadratic (order 2x2) Bézier triangle and quadrilateral surface patches and provide function evaluation code, using modern computing res…
Pycro-manager: open-source software for integrated microscopy hardware control and image processing
Henry Pinkard, Nico Stuurman, Laura Waller
μManager, an open-source microscopy acquisition software, has been an essential tool for many microscopy experiments over the past 15 years, but is not easy to use for experiments…
A probabilistic atlas for cell identification
Greg Bubnis, Steven Ban, Matthew D. DiFranco +1
We propose a general framework for a collaborative machine learning system to assist bioscience researchers with the task of labeling specific cell identities from microscopic stil…