activity
20182026
most citedHow Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities?

29 citations · 79 across the 23 of their papers we have counts for

collaborators
Showing cs.CLShow all

19 papers · 1 filter

cs.CL2026

MedSNIP: Building and Benchmarking Snippet-Level Granularity for Medical Fact Verification

Hasan Iqbal, Sarfraz Ahmad, Hyunjae Kim +5

A medical claim's correctness often depends not on the claim alone, but on the clinical structure around it. A claim may require a lab reference range, a causal or conditional link…

cs.CL2025★ 1 cited

Memorization in Large Language Models in Medicine: Prevalence, Characteristics, and Implications

Anran Li, Lingfei Qian, Mengmeng Du +18

Large Language Models (LLMs) have demonstrated significant potential in medicine, with many studies adapting them through continued pre-training or fine-tuning on medical data to e…

cs.CL2025

Med-PRM: Medical Reasoning Models with Stepwise, Guideline-verified Process Rewards

Jaehoon Yun, Jiwoong Sohn, Jungwoo Park +9

Large language models have shown promise in clinical decision making, but current approaches struggle to localize and correct errors at specific steps of the reasoning process. Thi…

cs.CL2024★ 7 cited

Rationale-Guided Retrieval Augmented Generation for Medical Question Answering

Jiwoong Sohn, Yein Park, Chanwoong Yoon +5

Large language models (LLM) hold significant potential for applications in biomedicine, but they struggle with hallucinations and outdated knowledge. While retrieval-augmented gene…

cs.CL2024

ETHIC: Evaluating Large Language Models on Long-Context Tasks with High Information Coverage

Taewhoo Lee, Chanwoong Yoon, Kyochul Jang +4

Recent advancements in large language models (LLM) capable of processing extremely long texts highlight the need for a dedicated evaluation benchmark to assess their long-context c…

cs.CL2024★ 1 cited

LEME: Open Large Language Models for Ophthalmology with Advanced Reasoning and Clinical Validation

Hyunjae Kim, Xuguang Ai, Sahana Srinivasan +27

The rising prevalence of eye diseases poses a growing public health burden. Large language models (LLMs) offer a promising path to reduce documentation workload and support clinica…

cs.CL2024

Learning from Negative Samples in Biomedical Generative Entity Linking

Chanhwi Kim, Hyunjae Kim, Sihyeon Park +3

Generative models have become widely used in biomedical entity linking (BioEL) due to their excellent performance and efficient memory usage. However, these models are usually trai…

cs.CL2024★ 7 cited

Augmenting Biomedical Named Entity Recognition with General-domain Resources

Yu Yin, Hyunjae Kim, Xiao Xiao +6

Training a neural network-based biomedical named entity recognition (BioNER) model usually requires extensive and costly human annotations. While several studies have employed mult…

cs.CL2024★ 5 cited

Small Language Models Learn Enhanced Reasoning Skills from Medical Textbooks

Hyunjae Kim, Hyeon Hwang, Jiwoo Lee +7

While recent advancements in commercial large language models (LM) have shown promising results in medical tasks, their closed-source nature poses significant privacy and security…

cs.CL2023

KU-DMIS-MSRA at RadSum23: Pre-trained Vision-Language Model for Radiology Report Summarization

Gangwoo Kim, Hajung Kim, Lei Ji +7

In this paper, we introduce CheXOFA, a new pre-trained vision-language model (VLM) for the chest X-ray domain. Our model is initially pre-trained on various multimodal datasets wit…

cs.CL2023★ 2 cited

LIQUID: A Framework for List Question Answering Dataset Generation

Seongyun Lee, Hyunjae Kim, Jaewoo Kang

Question answering (QA) models often rely on large-scale training datasets, which necessitates the development of a data generation framework to reduce the cost of manual annotatio…

cs.CL2022★ 1 cited

Automatic Creation of Named Entity Recognition Datasets by Querying Phrase Representations

Hyunjae Kim, Jaehyo Yoo, Seunghyun Yoon +1

Most weakly supervised named entity recognition (NER) models rely on domain-specific dictionaries provided by experts. This approach is infeasible in many domains where dictionarie…

cs.CL2021

Simple Questions Generate Named Entity Recognition Datasets

Hyunjae Kim, Jaehyo Yoo, Seunghyun Yoon +2

Recent named entity recognition (NER) models often rely on human-annotated datasets, requiring the significant engagement of professional knowledge on the target domain and entitie…

cs.CL2021★ 5 cited

Improving Tagging Consistency and Entity Coverage for Chemical Identification in Full-text Articles

Hyunjae Kim, Mujeen Sung, Wonjin Yoon +2

This paper is a technical report on our system submitted to the chemical identification task of the BioCreative VII Track 2 challenge. The main feature of this challenge is that th…

cs.CL2021

Learn to Resolve Conversational Dependency: A Consistency Training Framework for Conversational Question Answering

Gangwoo Kim, Hyunjae Kim, Jungsoo Park +1

One of the main challenges in conversational question answering (CQA) is to resolve the conversational dependency, such as anaphora and ellipsis. However, existing approaches do no…

cs.CL2021

"Killing Me" Is Not a Spoiler: Spoiler Detection Model using Graph Neural Networks with Dependency Relation-Aware Attention Mechanism

Buru Chang, Inggeol Lee, Hyunjae Kim +1

Several machine learning-based spoiler detection models have been proposed recently to protect users from spoilers on review websites. Although dependency relations between context…

cs.CL2021★ 29 cited

How Do Your Biomedical Named Entity Recognition Models Generalize to Novel Entities?

Hyunjae Kim, Jaewoo Kang

The number of biomedical literature on new biomedical concepts is rapidly increasing, which necessitates a reliable biomedical named entity recognition (BioNER) model for identifyi…

cs.CL2020★ 3 cited

Look at the First Sentence: Position Bias in Question Answering

Miyoung Ko, Jinhyuk Lee, Hyunjae Kim +2

Many extractive question answering models are trained to predict start and end positions of answers. The choice of predicting answers as positions is mainly due to its simplicity a…

cs.CL2018★ 13 cited

Ranking Paragraphs for Improving Answer Recall in Open-Domain Question Answering

Jinhyuk Lee, Seongjun Yun, Hyunjae Kim +2

Recently, open-domain question answering (QA) has been combined with machine comprehension models to find answers in a large knowledge source. As open-domain QA requires retrieving…