activity
20192024
most citedPIGNet2: A Versatile Deep Learning-based Protein-Ligand Interaction Prediction Model for Binding Affinity Scoring and Virtual Screening

4 citations · 10 across the 8 of their papers we have counts for

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Showing cs.LGShow all

6 papers · 1 filter

cs.LG2024

Riemannian Denoising Model for Molecular Structure Optimization with Chemical Accuracy

Jeheon Woo, Seonghwan Kim, Jun Hyeong Kim +1

We introduce a framework for molecular structure optimization using denoising model on a physics-informed Riemannian manifold (R-DM). Unlike conventional approaches operating in Eu…

cs.LG2024

Discrete Diffusion Schrödinger Bridge Matching for Graph Transformation

Jun Hyeong Kim, Seonghwan Kim, Seokhyun Moon +3

Transporting between arbitrary distributions is a fundamental goal in generative modeling. Recently proposed diffusion bridge models provide a potential solution, but they rely on…

cs.LG2024★ 1 cited

Transition Path Sampling with Improved Off-Policy Training of Diffusion Path Samplers

Kiyoung Seong, Seonghyun Park, Seonghwan Kim +2

Understanding transition pathways between two meta-stable states of a molecular system is crucial to advance drug discovery and material design. However, unbiased molecular dynamic…

cs.LG2023

C3Net: interatomic potential neural network for prediction of physicochemical properties in heterogenous systems

Sehan Lee, Jaechang Lim, Woo Youn Kim

Understanding the interactions of a solute with its environment is of fundamental importance in chemistry and biology. In this work, we propose a deep neural network architecture f…

cs.LG2021

Fragment-based molecular generative model with high generalization ability and synthetic accessibility

Seonghwan Seo, Jaechang Lim, Woo Youn Kim

Deep generative models are attracting great attention for molecular design with desired properties. Most existing models generate molecules by sequentially adding atoms. This often…

cs.LG2019

Scaffold-based molecular design using graph generative model

Jaechang Lim, Sang-Yeon Hwang, Seungsu Kim +2

Searching new molecules in areas like drug discovery often starts from the core structures of candidate molecules to optimize the properties of interest. The way as such has called…