393 citations · 2.5k across the 60 of their papers we have counts for
8 papers · 1 filter
Inference of non-exponential kinetics through stochastic resetting
Ofir Blumer, Shlomi Reuveni, Barak Hirshberg
We present an inference scheme of long timescale, non-exponential kinetics from Molecular Dynamics simulations accelerated by stochastic resetting. Standard simulations provide val…
Universal Linear Response of First-Passage Kinetics: A Framework for Prediction and Inference
Tommer D. Keidar, Shlomi Reuveni
First-passage processes are pervasive across numerous scientific fields, yet a general framework for understanding their response to external perturbations remains elusive. While t…
Smart Resetting: An Energy-Efficient Strategy for Stochastic Search Processes
Ofir Tal-Friedman, Tommer D. Keidar, Shlomi Reuveni +1
Stochastic resetting, a method for accelerating target search in random processes, often incurs temporal and energetic costs. For a diffusing particle, a lower bound exists for the…
Adaptive Resetting for Informed Search Strategies and the Design of Non-equilibrium Steady-states
Tommer D. Keidar, Ofir Blumer, Barak Hirshberg +1
Stochastic resetting, the procedure of stopping and re-initializing random processes, has recently emerged as a powerful tool for accelerating processes ranging from queuing system…
Accelerating Molecular Dynamics through Informed Resetting
Jonathan R. Church, Ofir Blumer, Tommer D. Keidar +3
We present a procedure for enhanced sampling of molecular dynamics simulations through informed stochastic resetting. Many phenomena, such as protein folding and crystal nucleation…
Sokoban percolation on the Bethe lattice
Ofek Lauber Bonomo, Itamar Shitrit, Shlomi Reuveni
`With persistence, a drop of water hollows out the stone' goes the ancient Greek proverb. Yet, canonical percolation models do not account for interactions between a moving tracer…
Short-Time Infrequent Metadynamics for Improved Kinetics Inference
Ofir Blumer, Shlomi Reuveni, Barak Hirshberg
Infrequent Metadynamics is a popular method to obtain the rates of long timescale processes from accelerated simulations. The inference procedure is based on rescaling the first-pa…
Escape from textured adsorbing surfaces
Yuval Scher, Shlomi Reuveni, Denis S. Grebenkov
The escape dynamics of sticky particles from textured surfaces is poorly understood despite importance to various scientific and technological domains. In this work, we address thi…