68 citations · 79 across the 4 of their papers we have counts for
5 papers
MEDFORD: A human and machine readable metadata markup language
Polina Shpilker, John Freeman, Hailey McKelvie +7
Reproducibility of research is essential for science. However, in the way modern computational biology research is done, it is easy to lose track of small, but extremely critical,…
Clustered Hierarchical Anomaly and Outlier Detection Algorithms
Najib Ishaq, Thomas J. Howard, Noah M. Daniels
Anomaly and outlier detection is a long-standing problem in machine learning. In some cases, anomaly detection is easy, such as when data are drawn from well-characterized distribu…
Clustered Hierarchical Entropy-Scaling Search of Astronomical and Biological Data
Najib Ishaq, George Student, Noah M. Daniels
Both astronomy and biology are experiencing explosive growth of data, resulting in a "big data" problem that stands in the way of a "big data" opportunity for discovery. One common…
Entropy-scaling search of massive biological data
Y. William Yu, Noah M. Daniels, David Christian Danko +1
Many datasets exhibit a well-defined structure that can be exploited to design faster search tools, but it is not always clear when such acceleration is possible. Here, we introduc…
Remote Homology Detection in Proteins Using Graphical Models
Noah M. Daniels
Given the amino acid sequence of a protein, researchers often infer its structure and function by finding homologous, or evolutionarily-related, proteins of known structure and fun…